pycoMeth 0.2.4

Python package for nanopore DNA methylation analysis downstream to Nanopolish

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Full documentation is available at https://a-slide.github.io/pycoMeth/

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Python package for nanopore DNA methylation analysis downstream to Nanopolish

pycoMeth can be used for further analysis starting from the output files generated by Nanopolish call-methylation. The package contains tools to summarize the methylation data at CpG or CpG island resolution .pycoMeth also contains a simple method for differential methylation analysis across multiple samples.

pycoMeth workflow

Authors

• Adrien Leger - aleg {at} ebi.ac.uk