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Open source microscope control using python

Project description

pycromanager is a Python library for enabling microscope acquisition control and data analysis. It works together with Micro-manager and Micro-magellan.

Check out to the documentation for an idea of the capabilities and how to get started.

Have a cool example of something you've done with pycromanager or an idea for improvement? Reach out on the issues page. Contributions/ideas/examples welcome!

Installing pycro-manager

  1. Download the lastest version of micro-manager 2.0
  2. Install pycro-manager using pip install pycromanager
  3. Run Micro-Manager, select tools-options, and check the box that says Run server on port 4827 (you only need to do this once)

To verify everything is working, run the following code:

from pycromanager import Bridge

bridge = Bridge()
bridge.get_core()

which will give an output like:

Out[1]: JavaObjectShadow for : mmcorej.CMMCore

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