Interface with dbSNP VCF data

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Project description

pydbsnp

Interface with dbSNP VCF data

Installation

First install the python package via pip3

pip3 install pydbsnp

or

pip3 install --user pydbsnp

Once the python package is installed, download and index the dbSBP VCF data:

pydbsnp-download
pydbsnp-index

For hg19/GRCh37 coordinates:

pydbsnp-download --reference-build GRCh37
pydbsnp-index

Project details

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Avatar for anthony-aylward from gravatar.com anthony-aylward

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Release history Release notifications | RSS feed

2.0.2

2.0.1

2.0.0

1.0.0

0.1.14

0.1.13

0.1.12

0.1.11

0.1.10

0.1.9

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0.1.0

0.0.24

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0.0.9

This version

0.0.8

0.0.7

0.0.6

0.0.4

0.0.3

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