pydiffmap 0.1.1

Library for constructing variable bandwidth diffusion maps

This is the home of the documentation for pyDiffMap, an open-source project to develop a robust and accessible diffusion map code for public use. Our documentation is currently under construction, please bear with us.

• Free software: GPL

Installation

Pydiffmap is installable using pip. You can install it using the command

pip install pyDiffMap

In the meantime, you can install the package directly from the source directly by downloading the package from github and running the command below, optionally with the “-e” flag for an editable install.

pip install [source_directory]

Documentation

https://pyDiffMap.readthedocs.io/

Development

To run the all tests run:

tox

Note, to combine the coverage data from all the tox environments run:

Windows	set PYTEST_ADDOPTS=--cov-append tox
Other	PYTEST_ADDOPTS=--cov-append tox

If you don’t have tox installed, you can also run the python tests directly with

pytest

Changelog

0.1.0 (2017-12-06)

• Added base functionality to the code.