Python version of ggseqlogo. Based on plotnine (Python version of ggplot2). A derivative of plotnineSeqSuite.
Project description
Pyggseqlogo
Python version of ggseqlogo. Based on plotnine (Python version of ggplot2). A derivative of plotnineSeqSuite.
Installation
pip install pyggseqlogo
Getting Started
from plotnine import ggplot
from plotnineseqsuite import geom_logo
from plotnineseqsuite.data import seqs_dna
from pyggseqlogo import ggseqlogo, theme_logo
# The code is based on plotnineSeqSuite.
ggplot() + geom_logo(data=seqs_dna['MA0001.1']) + theme_logo()
# Pyggseqlogo provides a wrapper function for the above code.
ggseqlogo(seqs_dna['MA0001.1'])
# facet_wrap
ggseqlogo(seqs_dna, ncol=4)
Project details
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pyggseqlogo-0.9.0.tar.gz
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