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PyJAMAS is Just A More Awesome SIESTA

Project description

Logo GPLv3 License


PyJAMAS is Just A More Awesome Siesta.

Documentation and installation instructions

You can find the official PyJAMAS documentation, with detailed installation instructions, here.

Citing PyJAMAS

If you use PyJAMAS, please cite:

Fernandez-Gonzalez R, Balaghi N, Wang K, Hawkins R, Rothenberg K, McFaul C, Schimmer C, Ly M, do Carmo A, Scepanovic G, Erdemci-Tandogan G, Castle V. PyJAMAS: open-source, multimodal segmentation and analysis of microscopy images. * Bioinformatics*. 2021 Aug 13:btab589. doi: 10.1093/bioinformatics/btab589.


We are grateful for the generous support from the following agencies and institutions, which contribute to the development and maintenance of PyJAMAS:


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