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Tools for dealing with radiographs produced in DynamiX

Project description


Documentation here (requires login, contact Benjy for access, or compile it yourself following the details below).


Work in progress. Hopefully via pip install pynamix but YMMV. If installing from github, try cloning and then running:

python3 build
python3 install

If you make any changes to the source code, re-run those two lines to have your changes reflected in your installed package.


Try out the included Jupyter notebook to see how to use the package.


Should be handled in pip install for you. Currently requires:

  • python3
  • matplotlib
  • numpy
  • scipy
  • imageio


We use sphinx to manage the docs. Update documentation with:

cd docs
make html

Once these are built, you can commit and push the changes to github to have them refreshed on github pages. You can also view them locally.


A sorted implementation list is as follows:

1. Size measurement using the FFT technique
2. Option to choose between FFT and wavelet transform for size measurement
3. Wrapper for James's PIV code
4. Wrapper for James's fake radiograph generator

Deploying to PyPI (just a reminder for Benjy, please don't try this yourself)

Run the following to make a new distribution and upload it to PyPI. Note: You first need to update the version number in

python3 sdist
twine upload dist/*

Code style: black

Project details

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Files for pynamix, version 0.3
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Filename, size pynamix-0.3-py3.9.egg (67.4 kB) File type Egg Python version 0.3 Upload date Hashes View
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