Skip to main content

Python wrapper for C++ LCMS library OpenMS

Project description

This package contains Python bindings for a large part of the OpenMS library for mass spectrometry based proteomics. It thus provides providing facile access to a feature-rich, open-source algorithm library for mass-spectrometry based proteomics analysis. These Python bindings allow raw access to the data-structures and algorithms implemented in OpenMS, specifically those for file access (mzXML, mzML, TraML, mzIdentML among others), basic signal processing (smoothing, filtering, de-isotoping and peak-picking) and complex data analysis (including label-free, SILAC, iTRAQ and SWATH analysis tools).

You can install pyopenms using:

pip install pyopenms

Please see https://github.com/OpenMS/OpenMS/wiki/pyOpenMS for more information.

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

pyopenms-2.3.0.3.linux-x86_64.zip (24.1 MB view details)

Uploaded Source

Built Distributions

pyopenms-2.3.0.3-cp36-cp36m-manylinux1_x86_64.whl (49.6 MB view details)

Uploaded CPython 3.6m

pyopenms-2.3.0.3-cp35-cp35m-manylinux1_x86_64.whl (49.6 MB view details)

Uploaded CPython 3.5m

pyopenms-2.3.0.3-cp34-cp34m-manylinux1_x86_64.whl (49.6 MB view details)

Uploaded CPython 3.4m

pyopenms-2.3.0.3-cp27-cp27mu-manylinux1_x86_64.whl (49.6 MB view details)

Uploaded CPython 2.7mu

pyopenms-2.3.0.3-cp27-cp27m-manylinux1_x86_64.whl (49.6 MB view details)

Uploaded CPython 2.7m

File details

Details for the file pyopenms-2.3.0.3.linux-x86_64.zip.

File metadata

File hashes

Hashes for pyopenms-2.3.0.3.linux-x86_64.zip
Algorithm Hash digest
SHA256 493f84cf0020d835754db3a525c9a28e46b67f614164da69217d1925c8df9e72
MD5 8a39ac389d79745cb05173cf805164a3
BLAKE2b-256 b4eaeffe3f3996bfb864fac80d6d61c2ab6a3d6d141652945eea4462804b3087

See more details on using hashes here.

File details

Details for the file pyopenms-2.3.0.3-cp36-cp36m-manylinux1_x86_64.whl.

File metadata

File hashes

Hashes for pyopenms-2.3.0.3-cp36-cp36m-manylinux1_x86_64.whl
Algorithm Hash digest
SHA256 84f4e748eb300916e2dac7d8b9c596f33e0044c9bc8f90c9538acb8208ab4ed4
MD5 e591fc7a45dc810c2eb0b09aff4117cd
BLAKE2b-256 1864882eb9c92887f871e0777ff9c83ab2081742e3003c2a8b7525efcffb3a89

See more details on using hashes here.

File details

Details for the file pyopenms-2.3.0.3-cp35-cp35m-manylinux1_x86_64.whl.

File metadata

File hashes

Hashes for pyopenms-2.3.0.3-cp35-cp35m-manylinux1_x86_64.whl
Algorithm Hash digest
SHA256 986de017b85e9300df0f950dc95906e8fa3aed0876b419816c3ff7e003ccde5e
MD5 0555eab4d59086f89e906a973dc12739
BLAKE2b-256 cdb6c3c1c02238e1deebc349b61b6eecf18220e8bb8677a0ded5e84e23fbdd74

See more details on using hashes here.

File details

Details for the file pyopenms-2.3.0.3-cp34-cp34m-manylinux1_x86_64.whl.

File metadata

File hashes

Hashes for pyopenms-2.3.0.3-cp34-cp34m-manylinux1_x86_64.whl
Algorithm Hash digest
SHA256 aedb0cc84606549abbdde191fe919dfd05386fdd65d133f7d69089e5f4e9e630
MD5 efdd1640848a5c8144cf469712622ec9
BLAKE2b-256 a778aebdc5380da6b03c60eb85eae9b95a29c7bd12eee30f35fb695f5e2ab22d

See more details on using hashes here.

File details

Details for the file pyopenms-2.3.0.3-cp27-cp27mu-manylinux1_x86_64.whl.

File metadata

File hashes

Hashes for pyopenms-2.3.0.3-cp27-cp27mu-manylinux1_x86_64.whl
Algorithm Hash digest
SHA256 0c6866872ba1d3440a5fc0d93995f51ac85f3af2772defc9674a6ac71cf75eb6
MD5 53228fa7e5c31ec64a23a4f6a0edd896
BLAKE2b-256 5ad8fda6b8d92fe0975313ae745a6be84e65b63735b58c1e0223eb0f0515bff5

See more details on using hashes here.

File details

Details for the file pyopenms-2.3.0.3-cp27-cp27m-manylinux1_x86_64.whl.

File metadata

File hashes

Hashes for pyopenms-2.3.0.3-cp27-cp27m-manylinux1_x86_64.whl
Algorithm Hash digest
SHA256 f81c89d0bb4738fe65ae4c87ccb4fc165eaa8db2f280622a5fb7900da129ffaa
MD5 55bced9963e75d0782b68d79626a655b
BLAKE2b-256 c018ec18c4f6e4e19da5cd3884b55856aef57efcfa6a713bf3cd80abfdd42924

See more details on using hashes here.

Supported by

AWS AWS Cloud computing and Security Sponsor Datadog Datadog Monitoring Fastly Fastly CDN Google Google Download Analytics Pingdom Pingdom Monitoring Sentry Sentry Error logging StatusPage StatusPage Status page