Skip to main content

Toolkits for NCBI Pubmed

Project description

NCBI Pubmed Toolkits

Requirements

  • Python3.6+

Installation

python3 -m pip install -U pypubmed

Usage

search

search Pubmed with term

pypubmed search --help

# do not translate
pypubmed search -l 5 ngs

# translate with a local proxies
pypubmed -p http://127.0.0.1:1081 search ngs -l 5

advance-search

advance search builder

pypubmed advance-search --help

citations

generate citations for given PMID

pypubmed citations --help

Todos

  • HTML output
  • PDF downloader
  • GUI application
  • Local paper manager

Documents

https://pypubmed.readthedocs.io/en/latest/

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

pypubmed-1.1.1.tar.gz (13.6 kB view details)

Uploaded Source

Built Distribution

pypubmed-1.1.1-py3-none-any.whl (16.6 kB view details)

Uploaded Python 3

File details

Details for the file pypubmed-1.1.1.tar.gz.

File metadata

  • Download URL: pypubmed-1.1.1.tar.gz
  • Upload date:
  • Size: 13.6 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/4.0.2 CPython/3.8.8

File hashes

Hashes for pypubmed-1.1.1.tar.gz
Algorithm Hash digest
SHA256 ea481d104e0d4d7c70f16ca9c8785db7885d135c169b3073b193d25ddf3bef11
MD5 7b9dbe76b881a44b6e2ea601c015018f
BLAKE2b-256 5008d9b1f4a6ac625f41df45177b9f03370e7ae1970f3b41e6e88155daa0bf30

See more details on using hashes here.

File details

Details for the file pypubmed-1.1.1-py3-none-any.whl.

File metadata

  • Download URL: pypubmed-1.1.1-py3-none-any.whl
  • Upload date:
  • Size: 16.6 kB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/4.0.2 CPython/3.8.8

File hashes

Hashes for pypubmed-1.1.1-py3-none-any.whl
Algorithm Hash digest
SHA256 4f6eca76b70afd4d9f39a68667ced4d1f7baa002d865bd55eb070af491976a9b
MD5 aeb635e9df6b8416025341b20b9adaa1
BLAKE2b-256 682afed7b586a09ab8ac0dcc311e1e834360c85a1b6cae3cac07722db870b5cd

See more details on using hashes here.

Supported by

AWS AWS Cloud computing and Security Sponsor Datadog Datadog Monitoring Fastly Fastly CDN Google Google Download Analytics Microsoft Microsoft PSF Sponsor Pingdom Pingdom Monitoring Sentry Sentry Error logging StatusPage StatusPage Status page