The Python Simulator for Cellular Systems - simulation and analysis tools for modelling biological systems
PySCeS is developed by the Triple-J Group for Molecular Cell Physiology in order to try model and understand the complex processes and systems which make up the living cell.
- PySCeS features, amongst other things:
A text based model description language.
A structural analysis module.
Integrators for time simulation
Non-linear solvers for steady-state analysis
A module for performing Metabolic Control Analysis
A bifurcation module for systems which exhibit multiple steady states
A variety of extra utilites for parameter scans, data output and plotting.
A dynamic module loading framework.
SBML import and export capability.