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A utility for creation of pepXML files from Python objects and TandemXML files.

Project description

pyteomics.pepxmltk - a pepXML writer and Tandem2XML converter

pyteomics.pepxmltk is a module based on the pyteomics package that allows creation of pepXML files from Python objects of a certain structure. The structure corresponds to tokens generated by the pyteomics TandemXML parser.

This package provides a module that can be used for writing pepXML files from your Python code, as well as a command-line script for conversion, merging or filtering of X!Tandem files to pepXML. Unlike its analog from Trans-Proteomic Pipeline (TPP), the script is capable of handling non-standard enzymes.

Dependencies

  • pyteomics
  • numpy
  • lxml
  • jinja2

Project details


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Filename, size & hash SHA256 hash help File type Python version Upload date
pyteomics.pepxmltk-0.2.7-py2.py3-none-any.whl (12.2 kB) Copy SHA256 hash SHA256 Wheel py2.py3 Feb 3, 2017
pyteomics.pepxmltk-0.2.7.tar.gz (13.0 kB) Copy SHA256 hash SHA256 Source None Feb 3, 2017

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