pytest-reana 0.9.0a4

Pytest fixtures for REANA.

About

pytest-REANA is a component of the REANA reusable and reproducible research data analysis platform. It provides pytest fixtures and test utilities.

Features

• pytest fixtures

• mocking OpenAPI client with request format validation

• mocking Advanced Message Queuing Protocol consumers and producers

• mocking Celery tasks

• mocking file system workspace access

• mocking database access

• includes sample workspace directory

Usage

The detailed information on how to install and use REANA can be found in docs.reana.io.

Useful links

• REANA project home page

• REANA user documentation

• REANA user support forum

• pytest-REANA releases

• pytest-REANA developer documentation

• pytest-REANA known issues

• pytest-REANA source code

Changes

Version 0.9.0 (UNRELEASED)

• Fixes location of Celery docs for ReadTheDocs pages.

• Removes hard-dependency on black code formatter version.

Version 0.8.1 (2022-01-05)

• Adds support for Python 3.10.

Version 0.8.0 (2021-11-22)

• Adds nested Yadage workflow specification fixture.

• Adds empty workflow workspaces for sample workflows by default.

• Adds internal representation of a scatter-gather Snakemake workflow fixture.

• Changes tmp_shared_volume_path fixture to be configurable through environment variable.

• Changes fixtures to run with the full workspace path stored in the database.

• Removes support for Python 2.

Version 0.7.2 (2021-07-02)

• Changes internal dependencies to remove click.

Version 0.7.1 (2021-03-17)

• Adds support for Python 3.9.

• Fixes minor code warnings.

• Fixes installation by upgrading REANA-DB version.

Version 0.7.0 (2020-10-20)

• Adds new __reana database schema for db fixture.

• Fixes a problem related to duplicated database session.

• Changes code formatting to respect black coding style.

• Changes documentation to single-page layout.

Version 0.6.0 (2019-12-19)

• Adds fixtures for secrets store.

• Centralises test requirements.

• Adds Python 3.8 support.

Version 0.5.0 (2019-04-16)

• Makes workspace path configurable for the sample_workflow_workspace fixture through the path parameter.

• Adds sample_serial_workflow_in_db fixture.

• Exposes previously hidden sample_yadage_workflow_in_db fixture.

• Adds missing database session close in session fixture.

• Adds helpers to represent starting and requeueing job conditions, sample_condition_for_starting_queued_workflows and sample_condition_for_requeueing_workflows.

Version 0.4.1 (2018-11-06)

• Adds directory including sample workspace data.

Version 0.4.0 (2018-11-06)

• Initial public release.

Please beware

Please note that REANA is in an early alpha stage of its development. The developer preview releases are meant for early adopters and testers. Please don’t rely on released versions for any production purposes yet.