Pydiver: ecological diversity analysis in Python
Project description
# PyDiver: ecological diversity analysis in Python
PyDiver is a lightweight software package for calculating Simpson diversity with error bars.
It provides a reference implementation of the unbiased variance estimates proposed in [Tiffeau-Mayer 2024](https://doi.org/10.1103/PhysRevE.109.064411).
## Installation
The quickest way to install Pyrepseq is via pip:
pip install python-diver
Note that this package is called python-diver on PyPI.
## Documentation and examples
You can find API documentation on [readthedocs](https://pydiver.readthedocs.io/en/latest/?badge=latest). You can also create a local copy of the API documentation by running:
`bash make html `
in the docs folder.
You can find usage examples by looking at the code in the [pub_simpsonvar](https://github.com/andim/pydiver/tree/main/pub_simpsonvar) directory.
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