qnorm 0.0.8

Quantile normalization

qnorm

quantile normalization made easy.

Quick example

We recreate the example of Wikipedia:

import numpy as np
import qnorm

vals = np.array([
    [5, 4, 3],
    [2, 1, 4],
    [3, 4, 6],
    [4, 2, 8]])

print(qnorm.quantile_normalize(vals))

which prints this:

>>> [[5.66666667 5.16666667 2.        ]
     [2.         2.         3.        ]
     [3.         5.16666667 4.66666667]
     [4.66666667 3.         5.66666667]]

Installation

pip

pip install qnorm

conda

conda install -c conda-forge qnorm