Reversible Data Transforms
Project description
Overview
RDT is a Python library used to transform data for data science libraries and preserve the transformations in order to revert them as needed.
Important Links | |
---|---|
:computer: Website | Check out the SDV Website for more information about the project. |
:orange_book: SDV Blog | Regular publshing of useful content about Synthetic Data Generation. |
:book: Documentation | Quickstarts, User and Development Guides, and API Reference. |
:octocat: Repository | The link to the Github Repository of this library. |
:scroll: License | The entire ecosystem is published under the MIT License. |
:keyboard: Development Status | This software is in its Pre-Alpha stage. |
Community | Join our Slack Workspace for announcements and discussions. |
Tutorials | Run the SDV Tutorials in a Binder environment. |
Install
RDT is part of the SDV project and is automatically installed alongside it. For details about this process please visit the SDV Installation Guide
Optionally, RDT can also be installed as a standalone library using the following commands:
Using pip
:
pip install rdt
Using conda
:
conda install -c conda-forge rdt
For more installation options please visit the RDT installation Guide
Quickstart
In this short series of tutorials we will guide you through a series of steps that will help you getting started using RDT to transform columns, tables and datasets.
Transforming a column
In this first guide, you will learn how to use RDT in its simplest form, transforming
a single column loaded as a pandas.DataFrame
object.
1. Load the demo data
You can load some demo data using the rdt.get_demo
function, which will return some random
data for you to play with.
from rdt import get_demo
data = get_demo()
This will return a pandas.DataFrame
with 10 rows and 4 columns, one of each data type supported:
0_int 1_float 2_str 3_datetime
0 38.0 46.872441 b 2021-02-10 21:50:00
1 77.0 13.150228 NaN 2021-07-19 21:14:00
2 21.0 NaN b NaT
3 10.0 37.128869 c 2019-10-15 21:39:00
4 91.0 41.341214 a 2020-10-31 11:57:00
5 67.0 92.237335 a NaT
6 NaN 51.598682 NaN 2020-04-01 01:56:00
7 NaN 42.204396 c 2020-03-12 22:12:00
8 68.0 NaN c 2021-02-25 16:04:00
9 7.0 31.542918 a 2020-07-12 03:12:00
Notice how the data is random, so your output might look a bit different. Also notice how RDT introduced some null values randomly.
2. Load the transformer
In this example we will use the datetime column, so let's load a DatetimeTransformer
.
from rdt.transformers import DatetimeTransformer
transformer = DatetimeTransformer()
3. Fit the Transformer
Before being able to transform the data, we need the transformer to learn from it.
We will do this by calling its fit
method passing the column that we want to transform.
transformer.fit(data, columns=['3_datetime'])
4. Transform the data
Once the transformer is fitted, we can pass the data again to its transform
method in order
to get the transformed version of the data.
transformed = transformer.transform(data)
The output will be a numpy.ndarray
with two columns, one with the datetimes transformed
to integer timestamps, and another one indicating with 1s which values were null in the
original data.
array([[1.61299380e+18, 0.00000000e+00],
[1.62672924e+18, 0.00000000e+00],
[1.59919923e+18, 1.00000000e+00],
[1.57117554e+18, 0.00000000e+00],
[1.60414542e+18, 0.00000000e+00],
[1.59919923e+18, 1.00000000e+00],
[1.58570616e+18, 0.00000000e+00],
[1.58405112e+18, 0.00000000e+00],
[1.61426904e+18, 0.00000000e+00],
[1.59452352e+18, 0.00000000e+00]])
5. Revert the column transformation
In order to revert the previous transformation, the transformed data can be passed to
the reverse_transform
method of the transformer:
reversed_data = transformer.reverse_transform(transformed)
The output will be a pandas.Series
containing the reverted values, which should be exactly
like the original ones.
0 2021-02-10 21:50:00
1 2021-07-19 21:14:00
2 NaT
3 2019-10-15 21:39:00
4 2020-10-31 11:57:00
5 NaT
6 2020-04-01 01:56:00
7 2020-03-12 22:12:00
8 2021-02-25 16:04:00
9 2020-07-12 03:12:00
dtype: datetime64[ns]
Transforming a table
Once we know how to transform a single column, we can try to go the next level and transform a table with multiple columns.
1. Load the HyperTransformer
In order to manuipulate a complete table we will need to load a rdt.HyperTransformer
.
from rdt import HyperTransformer
ht = HyperTransformer()
2. Fit the HyperTransformer
Just like the transfomer, the HyperTransformer needs to be fitted before being able to transform data.
This is done by calling its fit
method passing the data
DataFrame.
ht.fit(data)
3. Transform the table data
Once the HyperTransformer is fitted, we can pass the data again to its transform
method in order
to get the transformed version of the data.
transformed = ht.transform(data)
The output, will now be another pandas.DataFrame
with the numerical representation of our
data.
0_int 0_int#1 1_float 1_float#1 2_str 3_datetime 3_datetime#1
0 38.000 0.0 46.872441 0.0 0.70 1.612994e+18 0.0
1 77.000 0.0 13.150228 0.0 0.90 1.626729e+18 0.0
2 21.000 0.0 44.509511 1.0 0.70 1.599199e+18 1.0
3 10.000 0.0 37.128869 0.0 0.15 1.571176e+18 0.0
4 91.000 0.0 41.341214 0.0 0.45 1.604145e+18 0.0
5 67.000 0.0 92.237335 0.0 0.45 1.599199e+18 1.0
6 47.375 1.0 51.598682 0.0 0.90 1.585706e+18 0.0
7 47.375 1.0 42.204396 0.0 0.15 1.584051e+18 0.0
8 68.000 0.0 44.509511 1.0 0.15 1.614269e+18 0.0
9 7.000 0.0 31.542918 0.0 0.45 1.594524e+18 0.0
4. Revert the table transformation
In order to revert the transformation and recover the original data from the transformed one,
we need to call reverse_transform
method of the HyperTransformer
instance passing it the
transformed data.
reversed_data = ht.reverse_transform(transformed)
Which should output, again, a table that looks exactly like the original one.
0_int 1_float 2_str 3_datetime
0 38.0 46.872441 b 2021-02-10 21:50:00
1 77.0 13.150228 NaN 2021-07-19 21:14:00
2 21.0 NaN b NaT
3 10.0 37.128869 c 2019-10-15 21:39:00
4 91.0 41.341214 a 2020-10-31 11:57:00
5 67.0 92.237335 a NaT
6 NaN 51.598682 NaN 2020-04-01 01:56:00
7 NaN 42.204396 c 2020-03-12 22:12:00
8 68.0 NaN c 2021-02-25 16:04:00
9 7.0 31.542918 a 2020-07-12 03:12:00
The DataCebo team is the proud developer of The Synthetic Data Vault Project, the largest open source ecosystem for synthetic data generation & evaluation. The ecosystem is home to multiple libraries that support synthetic data, including:
- 🔄 Data discovery & transformation. Reverse the transforms to reproduce realistic data.
- 🧠 Multiple machine learning models -- ranging from Copulas to Deep Learning -- to create tabular, multi table and time series data.
- 📊 Measuring quality and privacy of synthetic data, and comparing different synthetic data generation models.
Get started using the SDV package -- a fully integrated solution and your one-stop shop for synthetic data.Or, use the standalone libraries for specific needs.
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