Tools for de novo discovery of genomic germline IG and TR receptor sequences
Project description
Digger
A toolkit for the automatic annotation of V,D and J genes and associated features in IG receptor genomic loci.
For more details, please see the documentation.
Changes in v
Changes in v 0.5.6:
- compatibility update for receptor_utils 0.0.40
Changes in v 0.5.5:
- speed optimisation for dig_sequence
- allow find_alignments to be called without a -ref parameter
Changes in V 0.5.4:
- Minor fixes to handling of non-functional sequences
Changes in V 0.5.3:
- Fixes to annotation in reverse-sense: false positives were not being filtered correctly
- Introduction of dig_sequence: targeted annotation of an identified sequence
Changes in V 0.5.1:
- (internal only) - Refactored elements of the code to make it more modular and easier to maintain.
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