Additional tools for Relion tomo
Project description
reliontomotools
Additional tools for subtomogram analysis in Relion tomo.
Install
pip install reliontomotools
Scripts
warptomo2relion
motl2relion
relion2motl
Converts refinement of deformation models, particle poses and CTF paramaters from WARP/M to Relion tomo.
Example
warptomo2relion -i 'WarpXML/TS_*.xml' -s 'tomograms/TS_*/TS_*_aligned.mrc' -d 1800 -o WarpConverted -p Refine3D/job010/run_data.star
motl2relion allmotl_at_17.em -o allmotl_at_17.star -p 1.75
motl2relion --evenodd allmotl_at_even_17.em allmotl_at_odd_17.em -o allmotl_at_17_2.star -p 1.75
relion2motl -i allmotl_at_17.star -o allmotl_at_17_star.em --angpix 1.75
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