repype 1.0.0b1

Reproducible batch processing using pipelines for scientific computing.

⚠️ This branch is currently not stable. ⚠️

See https://github.com/kostrykin/repype/releases/tag/v0.1.0 for the last stable version.

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Installation:

git clone [e-mail]:kostrykin/repype.git
cd repype && python setup.py install

Documentation: https://repype.readthedocs.io

Development instructions:

• To run the test suite, first install the testing dependencies:

  pip install -r tests/requirements.txt
  python -m unittest

• Instead of using python -m unittest, use coverage.py to also produce a test coverage report:

  coverage run -m unittest && python -m coverage html

  This requires coverage.py to be installed additionally, like pip install coverage.

• To build the documentation locally:

  pip install -r docs/requirements.txt
  cd docs
  make html

  You can then open build/html/index.html to view the documentation.