Skip to main content

Framework for creating (partially) reversible neural networks with PyTorch

Project description

RevTorch

Framework for creating (partially) reversible neural networks with PyTorch

RevTorch is introduced and explained in our paper A Partially Reversible U-Net for Memory-Efficient Volumetric Image Segmentation, which was accepted for presentation at MICCAI 2019.

If you find this code helpful in your research please cite the following paper:

@article{PartiallyRevUnet2019Bruegger,
         author={Br{\"u}gger, Robin and Baumgartner, Christian F.
         and Konukoglu, Ender},
         title={A Partially Reversible U-Net for Memory-Efficient Volumetric Image Segmentation},
         journal={arXiv:1906.06148},
         year={2019},

Installation

Use pip to install RevTorch:

$ pip install revtorch

RevTorch requires PyTorch. However, PyTorch is not included in the dependencies since the required PyTorch version is dependent on your system. Please install PyTorch following the instructions on the PyTorch website.

Usage

This example shows how to use the RevTorch framework.

import torch
import torchvision
import torchvision.transforms as transforms
import torch.nn as nn
import torch.nn.functional as F
import torch.optim as optim
import revtorch as rv

def train():
    trainset = torchvision.datasets.CIFAR10(root="./data", train=True, download=True, transform=transforms.ToTensor())
    trainloader = torch.utils.data.DataLoader(trainset, batch_size=4, shuffle=True)

    net = PartiallyReversibleNet()
    criterion = nn.CrossEntropyLoss()
    optimizer = optim.Adam(net.parameters())

    for epoch in range(2):

        running_loss = 0.0
        for i, data in enumerate(trainloader, 0):
            inputs, labels = data
            optimizer.zero_grad()
            outputs = net(inputs)
            loss = criterion(outputs, labels)
            loss.backward()
            optimizer.step()

            #logging stuff
            running_loss += loss.item()
            LOG_INTERVAL = 200
            if i % LOG_INTERVAL == (LOG_INTERVAL-1):  # print every 2000 mini-batches
                print('[%d, %5d] loss: %.3f' % (epoch + 1, i + 1, running_loss / LOG_INTERVAL))
                running_loss = 0.0

class PartiallyReversibleNet(nn.Module):
    def __init__(self):
        super(PartiallyReversibleNet, self).__init__()

        #initial non-reversible convolution to get to 32 channels
        self.conv1 = nn.Conv2d(3, 32, 3)

        #construct reversible sequencce with 4 reversible blocks
        blocks = []
        for i in range(4):

            #f and g must both be a nn.Module whos output has the same shape as its input
            f_func = nn.Sequential(nn.ReLU(), nn.Conv2d(16, 16, 3, padding=1))
            g_func = nn.Sequential(nn.ReLU(), nn.Conv2d(16, 16, 3, padding=1))

            #we construct a reversible block with our F and G functions
            blocks.append(rv.ReversibleBlock(f_func, g_func))

        #pack all reversible blocks into a reversible sequence
        self.sequence = rv.ReversibleSequence(nn.ModuleList(blocks))

        #non-reversible convolution to get to 10 channels (one for each label)
        self.conv2 = nn.Conv2d(32, 10, 3)

    def forward(self, x):
        x = self.conv1(x)

        #the reversible sequence can be used like any other nn.Module. Memory-saving backpropagation is used automatically
        x = self.sequence(x)

        x = self.conv2(F.relu(x))
        x = F.avg_pool2d(x, (x.shape[2], x.shape[3]))
        x = x.view(x.shape[0], x.shape[1])
        return x

if __name__ == "__main__":
    train()

Python version

Tested with Python 3.6 and PyTorch 1.1.0. Should work with any version of Python 3.

Changelog

Version 0.2.4

  • Added option to disable eager discarding of variables to allow for multiple backward() calls

Version 0.2.3

  • Added option to use the same random seed for the forward and backwar pass (Pull request)

Version 0.2.1

  • Added option to select the dimension along which the tensor is split (Pull request)

Version 0.2.0

  • Fixed memory leak when not consuming output of the reversible block (Issue)

Version 0.1.0

  • Initial release

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Files for revtorch, version 0.2.4
Filename, size File type Python version Upload date Hashes
Filename, size revtorch-0.2.4.tar.gz (5.6 kB) File type Source Python version None Upload date Hashes View hashes

Supported by

Elastic Elastic Search Pingdom Pingdom Monitoring Google Google BigQuery Sentry Sentry Error logging AWS AWS Cloud computing DataDog DataDog Monitoring Fastly Fastly CDN DigiCert DigiCert EV certificate StatusPage StatusPage Status page