Skip to main content

Plot read counts of RiboSeq data from BAM format alignment files

Project description

https://img.shields.io/travis/vimalkumarvelayudhan/riboplot.svg https://img.shields.io/pypi/v/riboplot.svg

RiboPlot includes programs to plot and output Ribo-Seq read counts from an alignment file (BAM format).

There are two programs in the package:

riboplot

Plot and output read counts (csv) for a single transcript.

ribocount

Output read counts for all transcripts in an alignment.

For help on using these programs, please refer to the Usage section of the documentation.

Free software: GPL license.

Documentation: https://riboplot.readthedocs.org.

History

0.1.0 (2015-08-24)

  • First release on PyPI.

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

riboplot-0.1.0.tar.gz (127.5 kB view details)

Uploaded Source

Built Distribution

riboplot-0.1.0-py2.py3-none-any.whl (124.0 kB view details)

Uploaded Python 2 Python 3

File details

Details for the file riboplot-0.1.0.tar.gz.

File metadata

  • Download URL: riboplot-0.1.0.tar.gz
  • Upload date:
  • Size: 127.5 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No

File hashes

Hashes for riboplot-0.1.0.tar.gz
Algorithm Hash digest
SHA256 428a884e348c5a993f35372afb786c75a22d417522a0fb38e6811f3f6eb6b6c2
MD5 047c7af90f7dbb1638158810a2960174
BLAKE2b-256 989299dcaa0f0bcb62a7b43cfad79fd2bfb44eb1dfada9d9eabb3a0991c375b2

See more details on using hashes here.

File details

Details for the file riboplot-0.1.0-py2.py3-none-any.whl.

File metadata

File hashes

Hashes for riboplot-0.1.0-py2.py3-none-any.whl
Algorithm Hash digest
SHA256 8f060a85f162b0140615864a2149b3f66601815f475ca01349100adbb22f4ec1
MD5 f2307ff910db51557a5bc13422d9d6a4
BLAKE2b-256 424ac419cc8c2707ff9a2983521e87fccc5b36a717f003fa7f4a0c703bb11af7

See more details on using hashes here.

Supported by

AWS AWS Cloud computing and Security Sponsor Datadog Datadog Monitoring Fastly Fastly CDN Google Google Download Analytics Microsoft Microsoft PSF Sponsor Pingdom Pingdom Monitoring Sentry Sentry Error logging StatusPage StatusPage Status page