RNA contamination detector
Project description
RNA Contamination Detector
rna_cd is a python package and command line tool designed to detect RNA contamination of DNA-seq experiments.
For our complete documentation, please checkout our readthedocs page.
Requirements
Python 3.5+
click
scikit-learn
pysam
matplotlib
Installation
PyPI
$ pip install rna-cd
Conda
- ::
$ conda install -c bioconda rna-cd
License
AGPLv3+
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