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An Illumina Sample Sheet parsing library

Project description

sample-sheet

Testing Status Documentation Build Status Code Coverage PyPI Release install with bioconda Python Versions MyPy Checked Code style: black

A permissively licensed library designed to replace Illumina's Experiment Manager.

❯ pip install sample-sheet

Or install with the Conda package manager after setting up your Bioconda channels:

❯ conda install sample-sheet

Which should be equivalent to:

❯ conda install -c bioconda -c conda-forge -c defaults sample-sheet

Features:

  • Roundtrip reading, editing, and writing of Sample Sheets
  • de novo creation creation of Sample Sheets
  • Exporting Sample Sheets to JSON

Read the documentation at: sample-sheet.readthedocs.io

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