An approch for interpreting disease-associated human variants using single-cell epigenomics
Project description
SC-VAR
An approach to interpreting disease-associated human variants using single-cell epigenomics
What can sc-var do?
Identify risk genes, gene sets, and cells related to different stages and diseases.
Infer cell types involved in complex traits and diseases using single-cell epigenomes AND does not rely on any other annotations and other Omics data.
How to install?
pip install sc-var
check https://pypi.org/project/sc-var/
About
Usage
Check Usage.ipynb for details
Data request:
Single cell ATAC-seq data & Peak co-accessibility Data & GWAS data
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