scanalignment 0.0.3

Scan Alignment of STXM images.

Scan Alignment is a PyQtGraph-based graphical user interface. It allows for horizontal line alignment of images collected in the TwinMic beamline through Scanning transmission x-ray microscopy (STXM) imaging technique.

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README

Introduction

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Installation

For standard Python installations, install pickpeak using pip:

pip install -U pip setuptools
pip install pickpeak

Usage

from pickpeak.pickpeak import PickPeak as pp
peaks = pp(spectrum) #spectrum shoud be type numpy.ndarray
peaks.gui_design() #calls the GUI
list_of_peaks = peaks.peak_list #returns the current list of peaks collected through the GUI

Requirements

• Python 2.7.

• Setuptools.

• Tifffile.

• H5Py.

• Matplotlib.

• NumPy.

• PyQt4, PyQt5 or PySide.

• PyQtGraph.

• SIP.