scdecipher

Decipher is a single-cell analysis package to integrate and compare perturbed samples to healthy samples, to identify the origin of the cell-states perturbations.

These details have not been verified by PyPI

Project description

Decipher

Decipher is a single-cell analysis toolkit to jointly analyze samples from distinct conditions (e.g. normal vs perturbed samples).

Quickstart tutorials

1. Example of Decipher on AML data.

Directories

.
├── decipher:       Source code
└── examples:       Examples and tutorials

How to cite Decipher

Please cite our preprint: coming soon. Deep generative model Deciphers derailed trajectories in Acute Myeloid Leukemia

BibTex

Coming soon

Chicago

Coming soon

Project details

These details have not been verified by PyPI

Release history Release notifications | RSS feed

0.1.2

Apr 18, 2024

This version

0.1.0

Nov 15, 2023

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

scdecipher-0.1.0.tar.gz (75.1 kB view hashes)

Uploaded Nov 15, 2023 Source

Built Distribution

scdecipher-0.1.0-py3-none-any.whl (31.8 kB view hashes)

Uploaded Nov 15, 2023 Python 3

Hashes for scdecipher-0.1.0.tar.gz

Hashes for scdecipher-0.1.0.tar.gz
Algorithm	Hash digest
SHA256	`d2c11068dec9423d9b0897818726c8a3b720db9c5aa33ffa383b97fe27157931`
MD5	`12a0c3bd83cc2304fff8d14590c89450`
BLAKE2b-256	`4e8a5adfff3dc44a294a2e49525851f2080f5f18a648c4376cc29a298522dbbc`

Hashes for scdecipher-0.1.0-py3-none-any.whl

Hashes for scdecipher-0.1.0-py3-none-any.whl
Algorithm	Hash digest
SHA256	`f29799d11fe13cc393e0a1045fb43cbe362f95ae0ad4638cf6f496e4ecfe3204`
MD5	`b2719ace246f361920977fa1c557780d`
BLAKE2b-256	`315e8aa184bf02b4e5970b8fe92672f99e496ff5a8ffec5b34affce16257277e`