single cell data analyis unification and communication toolkit
Project description
sciduck: single cell data analysis unification and communication toolkit
sciduck provides a transparent framework for single cell/nuclei quality control and annotation. The package was built following anndata and scanpy to easily fit into related workflows. It provides tranparency to single cell analysis pipelines for reproducible data analysis and annotation. The Python-based implementation efficiently deals with
datasets of more than one million cells.
Documentation
https://sciduck.readthedocs.io/en/latest/
Installation
pip install sciduck
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