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scikit-surgeryimage

Project description

scikit-surgeryimage
===============================

.. image:: https://weisslab.cs.ucl.ac.uk/WEISS/SoftwareRepositories/scikit-surgeryimage/raw/master/project-icon.png
:height: 128px
:width: 128px
:target: https://weisslab.cs.ucl.ac.uk/WEISS/SoftwareRepositories/scikit-surgeryimage

.. image:: https://weisslab.cs.ucl.ac.uk/WEISS/SoftwareRepositories/scikit-surgeryimage/badges/master/build.svg
:target: https://weisslab.cs.ucl.ac.uk/WEISS/SoftwareRepositories/scikit-surgeryimage/pipelines
:alt: GitLab-CI test status

.. image:: https://weisslab.cs.ucl.ac.uk/WEISS/SoftwareRepositories/scikit-surgeryimage/badges/master/coverage.svg
:target: https://weisslab.cs.ucl.ac.uk/WEISS/SoftwareRepositories/scikit-surgeryimage/commits/master
:alt: Test coverage

.. image:: https://readthedocs.org/projects/scikit-surgeryimage/badge/?version=latest
:target: http://scikit-surgeryimage.readthedocs.io/en/latest/?badge=latest
:alt: Documentation Status



scikit-surgeryimage is a python only project to implement image processing algorithms
that are useful for image-guided surgery.

scikit-surgeryimage was developed at the `Wellcome EPSRC Centre for Interventional and Surgical Sciences`_ in `University College London (UCL)`_.


Installing
~~~~~~~~~~

You can pip install directly from the repository as follows:
::

pip install git+https://weisslab.cs.ucl.ac.uk/WEISS/SoftwareRepositories/scikit-surgeryimage


Developing
^^^^^^^^^^

You can clone the repository using the following command:

::

git clone https://weisslab.cs.ucl.ac.uk/WEISS/SoftwareRepositories/scikit-surgeryimage


Running the tests
^^^^^^^^^^^^^^^^^

You can run the unit tests by installing and running tox:

::

pip install tox
tox

Contributing
^^^^^^^^^^^^

Please see the `contributing guidelines`_.


Useful links
^^^^^^^^^^^^

`Source code repository`_
`Documentation`_


Licensing and copyright
-----------------------

Copyright 2018 University College London.
scikit-surgeryimage is released under the BSD-3 license. Please see the `license file`_ for details.


Acknowledgements
----------------

Supported by `Wellcome`_ and `EPSRC`_.


.. _`Wellcome EPSRC Centre for Interventional and Surgical Sciences`: http://www.ucl.ac.uk/weiss
.. _`source code repository`: https://weisslab.cs.ucl.ac.uk/WEISS/SoftwareRepositories/scikit-surgeryimage
.. _`Documentation`: https://scikit-surgeryimage.readthedocs.io
.. _`University College London (UCL)`: http://www.ucl.ac.uk/
.. _`Wellcome`: https://wellcome.ac.uk/
.. _`EPSRC`: https://www.epsrc.ac.uk/
.. _`contributing guidelines`: https://weisslab.cs.ucl.ac.uk/WEISS/SoftwareRepositories/scikit-surgeryimage/blob/master/CONTRIBUTING.rst
.. _`license file`: https://weisslab.cs.ucl.ac.uk/WEISS/SoftwareRepositories/scikit-surgeryimage/blob/master/LICENSE


.. toctree::
:maxdepth: 4
:caption: Contents:


Project details


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