Scipion plugin tomosegmemtv.
Project description
Scipion - TomoSegMemTV plugin
Scipion plugin for segmentation and annotation of membranes (with tomoSegmenTV and membSegAnnotator)
Setup
Install this plugin in devel mode:
Using the command line:
scipion3 installp -p local/path/to/scipion-em-tomosegmembtv --develGetting the binaries for tomoSegmenTV:
TomoSegmenTV binaries must be downloaded from the following site https://sites.google.com/site/3demimageprocessing/tomosegmemtv, where a form must be filled and submitted to get instant download access. Download the standalone version (which will be a zip file) execute the following commands:
unzip DOWNLOADED/FILE -q -d SCIPION_HOME/software/em/TOMOSEGMEMB_DIRECTORY/tomosegmentv/Contact information:
If you experiment any problem, please contact us here: scipion-users@lists.sourceforge.net or open an issue –> https://github.com/scipion-em/scipion-em-tomosegmembtv/issues
We’ll be pleased to help.
Scipion Team
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