Skip to main content

Tools for 3D visualization and manipulation of tomography data

Project description

Scipion tomoviz plugin

This plugin contains a series of methods for the visualization and manipulation of 3D data (specially desgined for tomography).

Plugin Installation

This plugin is currently under initial development and it is not ready for production yet.

In the meantime, it can be used for development, base on Scipion v3.x with plugins.

This tomography plugin can be enabled by cloning this repository and execute the command:

git clone https://github.com/scipion-em/scipion-em-tomoviz.git
scipion installp -p ~/scipion-em-tomoviz --devel

The plugin needs PyQt5 to be installed in the device. The following commands can be used to install PyQt5 in different distributions:

Ubuntu:
sudo apt-get install python3-pyqt5

CentOS:
yum install qt5-qtbase-devel

Thee following libraries are also needed by PyQt.

Ubuntu:
sudo apt-get install libxcb-xinerama0
sudo apt install libxcb-image0

The viewers associated to this plugin require OpenGL 3.2 or later and Mesa 11.2 or later.

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

scipion-em-tomoviz-3.1.2.tar.gz (183.1 kB view details)

Uploaded Source

Built Distribution

scipion_em_tomoviz-3.1.2-py3-none-any.whl (193.4 kB view details)

Uploaded Python 3

File details

Details for the file scipion-em-tomoviz-3.1.2.tar.gz.

File metadata

  • Download URL: scipion-em-tomoviz-3.1.2.tar.gz
  • Upload date:
  • Size: 183.1 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/4.0.2 CPython/3.8.16

File hashes

Hashes for scipion-em-tomoviz-3.1.2.tar.gz
Algorithm Hash digest
SHA256 05019152e91fa5210636cca75ae455326eec26919a10d111f27d4b9d31bce811
MD5 a2574f2efb3dcc8cf5ba8be51afd189c
BLAKE2b-256 44b117416f03c113ea3a3ab252f66a921fd855a3d60de686da2f57b445c11115

See more details on using hashes here.

File details

Details for the file scipion_em_tomoviz-3.1.2-py3-none-any.whl.

File metadata

File hashes

Hashes for scipion_em_tomoviz-3.1.2-py3-none-any.whl
Algorithm Hash digest
SHA256 e62cf5cefe8d8848b3c89a409529a566de43ad95d1d0383f5522afcf5cf3a048
MD5 bbfb0194abb125bd01537027124078af
BLAKE2b-256 810c2227a51a57d98d45cfa12d6af994a4c7b2a7c1ac29af60d67d0423aa5b2c

See more details on using hashes here.

Supported by

AWS AWS Cloud computing and Security Sponsor Datadog Datadog Monitoring Fastly Fastly CDN Google Google Download Analytics Microsoft Microsoft PSF Sponsor Pingdom Pingdom Monitoring Sentry Sentry Error logging StatusPage StatusPage Status page