sdevelo 0.1

SDEvelo: a deep generative approach for transcriptional dynamics with cell-specific latent time and multivariate stochastic modeling

SDEvelo: a deep generative approach for transcriptional dynamics with cell-specific latent time and multivariate stochastic modeling

Overview

SDEvelo leverages advanced stochastic differential equations (SDE) to provide a novel approach to RNA velocity analysis in single-cell RNA sequencing (scRNA-seq). This deep generative model accurately captures the complex, stochastic nature of transcriptional dynamics, offering new insights into cell differentiation and state transitions.

Installation

Ensure you have Python 3.6 or later installed. SDEvelo can be installed using pip:

pip install sdevelo