SDEvelo: a deep generative approach for transcriptional dynamics with cell-specific latent time and multivariate stochastic modeling
Project description
SDEvelo: a deep generative approach for transcriptional dynamics with cell-specific latent time and multivariate stochastic modeling
Overview
SDEvelo leverages advanced stochastic differential equations (SDE) to provide a novel approach to RNA velocity analysis in single-cell RNA sequencing (scRNA-seq). This deep generative model accurately captures the complex, stochastic nature of transcriptional dynamics, offering new insights into cell differentiation and state transitions.
Installation
Ensure you have Python 3.6 or later installed. SDEvelo can be installed using pip:
pip install sdevelo
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