RNA Structure Ensemble Inference via Sequencing, Mutation Identification, and Clustering
Project description
SEISMIC-RNA
Structure Ensemble Inference by Sequencing, Mutation Identification, and Clustering of RNA
About
SEISMIC-RNA analyzes data from RNA mutational profiling experiments, such as DMS-MaPseq and SHAPE-MaP. This software introduces an optimized implementation of the algorithm DREEM for detecting and quantifying RNA structure ensembles.
Installation and Usage
Documentation for installing and using SEISMIC-RNA is available on GitHub Pages.
Issues
The issue page of the GitHub repository is the official location for reporting bugs and other issues. Before opening a new issue, please check if a similar issue already exists.
Contributors
SEISMIC-RNA has been developed by the following individuals in the lab of Silvi Rouskin at Harvard Medical School:
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
Built Distribution
Hashes for seismic_rna-0.11.2-py3-none-any.whl
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 | 24a0f3937edcfbebd2b30835cce38c756fffde40ef7667e3b8b3dd588837dadd |
|
| MD5 | 645b821fa1bfa0a23b3dea4b88470b49 |
|
| BLAKE2b-256 | bb9fbc7db97be9ba30ec2c2f356a1792500896fa7cdadc1e1c6ef9e0a065bb7b |
