Structure Ensemble Inference by Sequencing, Mutation Identification, and Clustering of RNA (SEISMIC-RNA)
Project description
SEISMIC-RNA
Structure Ensemble Inference by Sequencing, Mutation Identification, and Clustering of RNA
About
SEISMIC-RNA analyzes data from RNA mutational profiling experiments, such as DMS-MaPseq and SHAPE-MaP. This software introduces an optimized implementation of the algorithm DREEM for detecting and quantifying RNA structure ensembles.
Installation and Usage
Documentation for installing and using SEISMIC-RNA is available on GitHub Pages.
Issues
The issue page of the GitHub repository is the official location for reporting bugs and other issues. Before opening a new issue, please check if a similar issue already exists.
Contributors
SEISMIC-RNA has been developed by the following individuals in the lab of Silvi Rouskin at Harvard Medical School:
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
Built Distribution
Hashes for seismic_rna-0.15.0-py3-none-any.whl
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 | a33acb6768a78f8235cfa8471dece649a46776fe9724c113a85d8d29f6bfcc1f |
|
| MD5 | 71954f1aa0604463e23a3e457047bd05 |
|
| BLAKE2b-256 | b07c0739271724c55d68ffba14e03a0f2f3402828d6885952738ebecbf250882 |
