Structure Ensemble Inference by Sequencing, Mutation Identification, and Clustering of RNA (SEISMIC-RNA)
Project description
SEISMIC-RNA
Structure Ensemble Inference by Sequencing, Mutation Identification, and Clustering of RNA
About
SEISMIC-RNA analyzes data from RNA mutational profiling experiments, such as DMS-MaPseq and SHAPE-MaP. This software introduces an optimized implementation of the algorithm DREEM for detecting and quantifying RNA structure ensembles.
Installation and Usage
Documentation for installing and using SEISMIC-RNA is available on GitHub Pages.
Issues
The issue page of the GitHub repository is the official location for reporting bugs and other issues. Before opening a new issue, please check if a similar issue already exists.
Contributors
SEISMIC-RNA has been developed by the following individuals in the lab of Silvi Rouskin at Harvard Medical School:
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
Built Distribution
Hashes for seismic_rna-0.15.1-py3-none-any.whl
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 | 79c400d4c3e3a8a86597077da2dd83a5a7935cf2c54c2eb544958203efa2b400 |
|
| MD5 | f2021424d07bc76bdb93527226119f1e |
|
| BLAKE2b-256 | c5f80bdbc6d346b4ddc161f5bce8b5fe5af8c396f5104cbb71d63a3913688ec2 |
