Structure Ensemble Inference by Sequencing, Mutation Identification, and Clustering of RNA (SEISMIC-RNA)
Project description
SEISMIC-RNA
Structure Ensemble Inference by Sequencing, Mutation Identification, and Clustering of RNA
About
SEISMIC-RNA analyzes data from RNA mutational profiling experiments, such as DMS-MaPseq and SHAPE-MaP. This software introduces an optimized implementation of the algorithm DREEM for detecting and quantifying RNA structure ensembles.
Installation and Usage
Documentation for installing and using SEISMIC-RNA is available on GitHub Pages.
Issues
The issue page of the GitHub repository is the official location for reporting bugs and other issues. Before opening a new issue, please check if a similar issue already exists.
Contributors
SEISMIC-RNA has been developed by the following individuals in the lab of Silvi Rouskin at Harvard Medical School:
Project details
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
Built Distribution
Hashes for seismic_rna-0.15.2-py3-none-any.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | 7ad9f54bef52a40e368f9d2a602b1b6d991ca20e59926b513a206cf6fdb60522 |
|
MD5 | f19dd3cdb5e0bbe948ce44c788165f57 |
|
BLAKE2b-256 | 5f8a7e37b8bd0a6a737a1696413e9b5536bcb7777ad433617332c31b2ac1855f |