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A set of standalone application and pipelines dedicated to NGS (new generation sequencing) analysis

Project Description
Python version:3.5 (and 2.7 without snakemake)
Online documentation:
 On readthedocs
Issues and bug reports:
 On github
How to cite:Desvillechabrol D, Bouchier C, Cokelaer T and Kennedy S. Sequana: a set of flexible genomic pipelines for processing and reporting NGS analysis [v1; no peer reviewed]. F1000Research 2016, 5:1767 (poster) (doi: 10.7490/f1000research.1112656.1)

Sequana includes a set of pipelines related to NGS (new generation sequencing) including quality control, variant calling, coverage, taxonomy…

Please see the documentation for an up-to-date status and documentation.

Docker images (experimental):

Release History

Release History

This version
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0.4.1

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0.4.0

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0.3.0

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0.2.1

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0.2.0

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0.1.21

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0.1.20

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0.1.18

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0.1.17.1

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0.1.1

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0.0.3

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0.0.2

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sequana-0.4.1.tar.gz (12.9 MB) Copy SHA256 Checksum SHA256 Source Jul 20, 2017

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