Package for doing various ad-hoc quality control steps from MSK-ACCESS generated FASTQ or BAM files
Project description
# sequence_qc
Package for doing various ad-hoc quality control steps from MSK-ACCESS generated FASTQ or BAM files
[](https://travis-ci.com/msk-access/sequence_qc) [](https://pypi.python.org/pypi/sequence_qc) [](https://anaconda.org/ionox0/sequence-qc/)
Free software: Apache Software License 2.0
Documentation: [https://msk-access.gitbook.io/sequence-qc/](https://msk-access.gitbook.io/sequence-qc/)
## Installation
From pypi:
pip install sequence_qc
From conda:
conda install -c ionox0 -c conda-forge -c bioconda sequence-qc
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](https://travis-ci.com/msk-access/sequence_qc){kind=link}
](https://pypi.python.org/pypi/sequence_qc){kind=link}
](https://anaconda.org/ionox0/sequence-qc/){kind=link}