Some CLI Tools For The Secure Multi-party Genomic Analysis Website
Project description
sfkit
sfkit is a collection of CLI tools to help run certain types of federated and/or secure multi-party computation especially on genomic data. It is a companion to the website here.
Documentation
You can read the full documentation here.
Prerequisites
Installation
pip install sfkit
Usage
Usage: sfkit <auth | networking | generate_keys | register_data | run_protocol>
- auth: Authenticate with the CLI.
- networking: Setup the networking, including your IP address and any relevant ports.
- generate_keys: Generate your public and private cryptographic keys for use in encrypting the data.
- register_data: Register and validate your data.
- run_protocol: Run the protocol. As this command may be long-running, you may want to run it with a tool like nohup, screen or tmux to prevent it from terminating if you close this window/terminal. For example,
nohup sfkit run_protocol & tail -f nohup.out.
Questions
If you have questions or concerns, you can reach me at smendels@broadinstitute.org.
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