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Python package for featurizing sgRNAs for machine learning

Project description

sglearn

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Python package for featurizing sgRNAs for machine learning

Features

  • TODO

Credits

This package was created with Cookiecutter and the audreyr/cookiecutter-pypackage project template.

History

0.1.0 (2020-08-06)

  • First release on PyPI.

0.1.1 (2020-08-06)

  • Continuous integration setup

0.1.2 (2020-08-07)

  • Added functionality to featurize guides

0.1.3 (2020-09-11)

  • Added pam interaction feature

0.2.0 (2021-04-13)

  • Added PolyN feature

  • Added Tm guide feature

  • Removed return values from feature dict functions

  • Remove comma from Tm feature names

1.0.0 (2021-06-01)

  • Change DNA hybridization calculation to RNA/DNA hybridization for guide sequence

1.1.0 (2021-06-04)

  • Use RNA/DNA and DNA/DNA melting temperatures

1.2.0 (2021-06-08)

  • Add RNA/RNA melting temperatures

1.2.1 (2021-06-08)

  • Shrink RNA/RNA tm window for outliers

1.2.2 (2021-06-25)

  • Rename Tm RR to DG RR

1.2.3 (2021-06-25)

  • Update Travis

1.2.4 (2021-07-13)

  • Added parallelization

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