Skip to main content

Python package for featurizing sgRNAs for machine learning

Project description

sglearn

https://img.shields.io/pypi/v/sglearn.svg https://travis-ci.com/gpp-rnd/sglearn.svg?branch=master Documentation Status

Python package for featurizing sgRNAs for machine learning

Features

  • TODO

Credits

This package was created with Cookiecutter and the audreyr/cookiecutter-pypackage project template.

History

0.1.0 (2020-08-06)

  • First release on PyPI.

0.1.1 (2020-08-06)

  • Continuous integration setup

0.1.2 (2020-08-07)

  • Added functionality to featurize guides

0.1.3 (2020-09-11)

  • Added pam interaction feature

0.2.0 (2021-04-13)

  • Added PolyN feature

  • Added Tm guide feature

  • Removed return values from feature dict functions

  • Remove comma from Tm feature names

1.0.0 (2021-06-01)

  • Change DNA hybridization calculation to RNA/DNA hybridization for guide sequence

1.1.0 (2021-06-04)

  • Use RNA/DNA and DNA/DNA melting temperatures

1.2.0 (2021-06-08)

  • Add RNA/RNA melting temperatures

1.2.1 (2021-06-08)

  • Shrink RNA/RNA tm window for outliers

1.2.2 (2021-06-25)

  • Rename Tm RR to DG RR

1.2.3 (2021-06-25)

  • Update Travis

1.2.4 (2021-07-13)

  • Added parallelization

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

sglearn-1.2.5.tar.gz (12.9 kB view hashes)

Uploaded Source

Built Distribution

sglearn-1.2.5-py2.py3-none-any.whl (5.8 kB view hashes)

Uploaded Python 2 Python 3

Supported by

AWS AWS Cloud computing and Security Sponsor Datadog Datadog Monitoring Fastly Fastly CDN Google Google Download Analytics Microsoft Microsoft PSF Sponsor Pingdom Pingdom Monitoring Sentry Sentry Error logging StatusPage StatusPage Status page