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Command-line interface to preview HDF5 files

Project description

Show H5

A simple python-based command-line interface for previewing the contents of HDF5 files.

PyPi

Install

pip install show_h5

Command line usage

Basic use: python3 show_h5.py FILENAME

View usage: python3 show_h5.py -h

The following flags are also provided:

  • --section SECTION: View only the contents of the HDF5 group/dataset within the file
  • --show_attrs: Show the attributes of the datasets (if not used, defaults to not showing attributes)
  • --show_data: Show the contents of the datasets (if not used, defaults to only showing the name and dimensions). Warning: this may blow up with large datasets.

API usage

from show_h5 import print_h5
print_h5(h5_filename, section=None, show_attrs=False, show_data=False)

Parameters

h5_filename: (str) Name/location of the file to show

section: (str, optional) Group or dataset of the file to show (the default is None, which shows the contents of the whole file)

show_attrs: (bool, optional) Whether to show dataset attributes (the default is False, which only shows dataset contents)

show_data: (bool, optional) Whether to show the contents of the dataset. Warning: this can blow up with large datasets (the default is False, which only shows the name and size of the dataset)

Project details


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This version

0.1

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