Skip to main content

sinto: tools for single-cell data processing

Project description

https://badge.fury.io/py/sinto.svg https://pepy.tech/badge/sinto

Sinto is a toolkit for processing aligned single-cell data. Sinto includes functions to:

  • Subset reads from a BAM file by cell barcode
  • Create a scATAC-seq fragments file from a BAM file
  • Add read tags to a BAM file according to cell barcode information

Read the documentation at https://timoast.github.io/sinto

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Files for sinto, version 0.3.4
Filename, size File type Python version Upload date Hashes
Filename, size sinto-0.3.4-py3-none-any.whl (14.0 kB) File type Wheel Python version py3 Upload date Hashes View
Filename, size sinto-0.3.4.tar.gz (10.5 kB) File type Source Python version None Upload date Hashes View

Supported by

AWS AWS Cloud computing Datadog Datadog Monitoring DigiCert DigiCert EV certificate Facebook / Instagram Facebook / Instagram PSF Sponsor Fastly Fastly CDN Google Google Object Storage and Download Analytics Pingdom Pingdom Monitoring Salesforce Salesforce PSF Sponsor Sentry Sentry Error logging StatusPage StatusPage Status page