sinto: tools for single-cell data processing
Project description
Sinto is a toolkit for processing aligned single-cell data. Sinto includes functions to:
Subset reads from a BAM file by cell barcode
Create a scATAC-seq fragments file from a BAM file
Add read tags to a BAM file according to cell barcode information
Add read groups based on read tags
Copy or move read tags to another read tag
Add cell barcodes to FASTQ read names
Read the documentation at https://timoast.github.io/sinto
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