Serovar predictions from Salmonella whole-genome sequence assemblies by determination of antigen geneand cgMLST gene alleles using BLAST. Mash MinHash can also be used for serovar prediction.

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  • License: GNU General Public License v3 or later (GPLv3+) (GPLv3)
  • Author: Peter Kruczkiewicz
  • Tags Salmonella , serotyping , genotyping , cgMLST , BLAST , Mash , MinHash
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Avatar for aaron.petkau from gravatar.com aaron.petkau Avatar for kbessonov from gravatar.com kbessonov Avatar for peterk87 from gravatar.com peterk87 Avatar for phac-nml from gravatar.com phac-nml

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  • License: GNU General Public License v3 or later (GPLv3+) (GPLv3)
  • Author: Peter Kruczkiewicz
  • Tags Salmonella , serotyping , genotyping , cgMLST , BLAST , Mash , MinHash
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1.1.3

1.1.2

1.1.1

1.1.0

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0.3.5

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