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Refactor and reformat text data

Project description

Currently only includes one module: flextableparser. To use:

>>> from sliders import flextableparser
>>> parser = flextableparser.FlexTableParser(config.json, output_file, static_values)
>>> parser = flextableparser.FlexTableParser()
>>> parser.configure(json_file)
>>> parser.add_static_values(dict)
>>> parser.parse_file(input_file, output_file_handle)
>>> output = parser.parse_file(input_file)

$ text2table --schema=fastqc
$ text2table --schema=fastqc 2>&1 > fastqc.csv  # Send CSV output to file
$ text2table --schema=fastqc
$ text2table --schema=fastqc --output_file=out.csv
$ text2table --schema=fastqc --output_file=out.csv --static_values=series:test,sample:A
$ text2table --schema=fastqc ../tests/ ../tests/ 2>&1 >/dev/null

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