SlurmQueen
A Python 3 library for automatically running experiments on a black-box tool using a Slurm cluster. In particular, this harness allows you to:
- Define an experiment by declaring a list of tasks to run on a tool.
- Generate bash scripts that run each task.
- Run those bash scripts on a Slurm cluster and download the results.
- Analyze the results through an SQL interface.
See this jupyter notebook for detailed usage.
Installation
For most users, the recommended method to install is via pip:
pip install slurmqueen
Dependencies:
- paramiko
- pandas
- pathlib (included in Python 3.4 or higher)
- ipywidgets (optional)
- notebook (required to run the example notebook)
See requirements.txt for detailed version information, if needed.
Release files for slurmqueen 1.6.3
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| slurmqueen-1.6.3.tar.gz | 14.4 kB | Details |
Release files / slurmqueen-1.6.3.tar.gz
| Download URL | slurmqueen-1.6.3.tar.gz |
|---|---|
| Size | 14.4 kB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
00cb7192ac7c5eb7e814fef0124955e78b38ee6290f6f711d40eeb8a1cca07c0
|
|
BLAKE2b-256 checksum How to use checksums |
f589c6bc16e49c07d3dc612f67b5d926a7a781f7848e81dd0d5d1fb685735e3c
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/3.1.1 pkginfo/1.5.0.1 requests/2.23.0 setuptools/51.0.0 requests-toolbelt/0.9.1 tqdm/4.46.0 CPython/3.6.9
|