A Python 3 library for automatically running experiments using a Slurm cluster
Project description
SlurmQueen
A Python 3 library for automatically running experiments on a black-box tool using a Slurm cluster. In particular, this harness allows you to:
- Define an experiment by declaring a list of tasks to run on a tool.
- Generate bash scripts that run each task.
- Run those bash scripts on a Slurm cluster and download the results.
- Analyze the results through an SQL interface.
See this jupyter notebook for detailed usage.
Installation
For most users, the recommended method to install is via pip:
pip install slurmqueen
Dependencies:
- paramiko
- pandas
- ipywidgets (optional)
- click (required on the Slurm cluster to run the example)
- notebook (required to run the example notebook)
See requirements.txt for detailed version information, if needed.
Project details
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
slurmqueen-1.3.0.tar.gz
(11.9 kB
view details)
File details
Details for the file slurmqueen-1.3.0.tar.gz
.
File metadata
- Download URL: slurmqueen-1.3.0.tar.gz
- Upload date:
- Size: 11.9 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/1.13.0 pkginfo/1.4.2 requests/2.21.0 setuptools/41.0.1 requests-toolbelt/0.9.1 tqdm/4.31.1 CPython/3.6.5
File hashes
Algorithm | Hash digest | |
---|---|---|
SHA256 | b6f835ede4778edf4f93570f436e36788e94c891b14656fd895e1b497ba5a308 |
|
MD5 | 7be8f5651fbfe96cd3fa4b8963a57dc3 |
|
BLAKE2b-256 | ffe238d3bd393194c95e9d06fc9d01b0c124002f3a19b80b32e7c91623587505 |