SMETANA
Species METabolic interaction ANAlysis (SMETANA) is a python-based command line tool to analyse microbial communities.
It takes as input a microbial communtity (from a collection of genome-scale metabolic models in SBML format) and computes of several metrics that describe the potential for cross-feeding interactions between community members.
Documentation
For more details please check: http://smetana.readthedocs.io/
Installation
Can be easily installed using pip:
pip install smetana
Citing SMETANA:
The algorithms here implemented have been previously described in: Zelezniak et al, PNAS (2015).
1 maintainer
Metadata
1 maintainer
Release files for smetana 1.2.1
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Source distribution (sdist)
| File | Size | Uploaded | Provenance | Actions |
|---|---|---|---|---|
| smetana-1.2.1.tar.gz | 137.3 kB | Without provenance | Details for smetana-1.2.1.tar.gz |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Actions Reset |
|---|---|---|---|---|
| smetana-1.2.1-py3-none-any.whl | Python 3 | none | any | Details for smetana-1.2.1-py3-none-any.whl |
Total release size: 152.9 kB
Release files / smetana-1.2.1.tar.gz
| Download URL | smetana-1.2.1.tar.gz |
|---|---|
| Size | 137.3 kB |
| Tags | Source |
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Release files / smetana-1.2.1-py3-none-any.whl
| Download URL | smetana-1.2.1-py3-none-any.whl |
|---|---|
| Size | 15.6 kB |
| Tags | Python 3 |
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