smithnormalform 0.6.0

A tool for computing the Smith Normal Forms over arbitrary Principle Ideal Domains

Generalized Python Smith Normal Form

This project is a python package implementing the calculation of smith normal forms (SNFs) for matrices defined over arbitrary principal ideal domains.

Currently, this SNF library can calculate the SNF of matrices over either the integers or the Gaussian integers. Additionally it can be easily extended to any principal ideal domain.

While there appear to be several open source Smith Normal Form implementations in a variety of programming languages, many of these implementations only operate on the integers. This is, to our knowledge, the only open source Smith Normal Form calculator that operates over the generalized class of principal ideal domains.

What are Principal Ideal Domains?

Principal ideal domains are integral domains (rings that behave like the integers) where every ideal is a principal ideal. Speaking more generally, PIDs are a class of mathematical structures that are more structured than a commutative ring, but not necessarily as structured as a field. Two items in a PID will always have a greatest common denominator (although this GCD is not always easy to compute) and they will always have a unique factorization. Elements of a PID do not necessarily have inverses, which is why they are considered less structured than a field.

Some examples of PIDs include:

• integers
• Gaussian integers
• fields (finite fields, rational numbers, real numbers, complex numbers)
• single variable polynomials over a field

What is the Smith Normal Form of a matrix?

The Smith Normal form of a matrix is canonical way to represent a matrix defined over a PID. The smith normal form of a matrix A is a matrix J such that:

• all non-diagonal elements of J are zero
• along the diagonal of J, every element divides evenly into its predecessor until a zero is encountered and then all future diagonal elements are zero
• there exists unimodular matrices S and T such that S*A*T = J.

As an example if the matrix A is

A = [ 1 2 3 ]
    [ 4 5 6 ],

the Smith Normal Form of this matrix would be

J = [ 1 0 0 ]
    [ 0 3 0 ]

with complementary matrices

S = [ 1  0 ]
    [ 4 -1 ]

and

T = [ 1 -1  1 ]
    [ 0 -1 -2 ]
    [ 0  1  1 ].

Example Usage

The following is an example of how to set up a Smith Normal Form problem over the integers, run the computation, and interpret the results.

>>> from smithnormalform import matrix, snfproblem, z
>>> original_matrix = matrix.Matrix(2, 2, [z.Z(1), z.Z(2), z.Z(3), z.Z(4)])
>>> prob = snfproblem.SNFProblem(original_matrix)
>>> prob.computeSNF()
>>> print(prob.isValid())
True
>>> print(prob.A)
[ 1 2 ]
[ 3 4 ]
>>> print(prob.J)
[ -2 1 ]
[ 3 -1 ]
>>> print(prob.S * prob.A * prob.T == prob.J)
True

Adding New Principal Ideal Domains

The Smith Normal Form algorithm can be run on any subclass of the principal ideal domain class smithnormalform.pid.PID. In order to subclass PID, you will need to define several basic operations that are well defined on PIDs such as addition, multiplication, division, negation, and GCD.

Since every PID is a GCD Domain, greatest common divisor is a well defined operation for two elements of PID. Just because GCD is well-defined, however, does not mean it is easy (or even tractable) to compute. One way to find the GCD of two elements is the Euclidean algorithm; however, the Euclidean algorithm can only be applied to Euclidean domains. While all Euclidean domains are PIDs, not all PIDs are Euclidean domains.

This leaves us in an unfortunate position. While the Smith Normal Form algorithm implemented here is efficient in-and-of-itself and works for all PIDs, it is only efficient if GCD can be computed efficiently, which is not generally speaking true for all PIDs.

We resolve this conflict in the following way: We provide an abstract class for Euclidean domains (smithnormalform.ed.ED) that implements the euclidean algorithm for you. Extending this class requires you define a norm for your Euclidean domain; however, once you do so the GCD function required for PIDs will be completed for you without you needing to implement the Euclidean algorithm for yourself.

If you would like to run this algorithm on a PID that is not a Euclidean domain, you can extend the PID class smithnormalform.pid.PID directly, bypassing the Euclidean domain class. Doing this will require you to implement the GCD function directly. Please note that GCDs are requested frequently during the Smith Normal Form calculation so if the GCD function isn't efficient the Smith Normal Form computation may be intractable.