Skip to main content

Python module of the Smoldyn simulator

Project description

C/C++ CI PyPI version

Smoldyn

Smoldyn is a particle-based biochemical simulator for modeling molecular diffusion, surface interactions, and chemical reactions.

The Smoldyn webpage is at http://www.smoldyn.org. Go there to learn about Smoldyn, download the latest release, etc. This repository is here so that developers can collaborate on the code. This is the official Smoldyn repository, run by the main Smoldyn author, Steve Andrews. (It was called Smoldyn-official for a while, but got renamed to just Smoldyn.)

I welcome new contributions to the code. However, I also want to maintain Smoldyn's current design philosophy, so please contact me before writing new code so that we can discuss how additions can be made most useful. I am at steven.s.andrews@gmail.com.

Project details


Release history Release notifications | RSS feed

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distributions

No source distribution files available for this release.See tutorial on generating distribution archives.

Built Distributions

smoldyn-2.63a1.dev20201212-cp39-cp39-win_amd64.whl (817.4 kB view details)

Uploaded CPython 3.9 Windows x86-64

smoldyn-2.63a1.dev20201212-cp39-cp39-manylinux2010_x86_64.whl (1.7 MB view details)

Uploaded CPython 3.9 manylinux: glibc 2.12+ x86-64

smoldyn-2.63a1.dev20201212-cp39-cp39-macosx_10_15_x86_64.whl (1.0 MB view details)

Uploaded CPython 3.9 macOS 10.15+ x86-64

smoldyn-2.63a1.dev20201212-cp38-cp38-win_amd64.whl (817.1 kB view details)

Uploaded CPython 3.8 Windows x86-64

smoldyn-2.63a1.dev20201212-cp38-cp38-manylinux2010_x86_64.whl (1.7 MB view details)

Uploaded CPython 3.8 manylinux: glibc 2.12+ x86-64

smoldyn-2.63a1.dev20201212-cp37-cp37m-win_amd64.whl (816.6 kB view details)

Uploaded CPython 3.7m Windows x86-64

smoldyn-2.63a1.dev20201212-cp37-cp37m-manylinux2010_x86_64.whl (1.7 MB view details)

Uploaded CPython 3.7m manylinux: glibc 2.12+ x86-64

File details

Details for the file smoldyn-2.63a1.dev20201212-cp39-cp39-win_amd64.whl.

File metadata

  • Download URL: smoldyn-2.63a1.dev20201212-cp39-cp39-win_amd64.whl
  • Upload date:
  • Size: 817.4 kB
  • Tags: CPython 3.9, Windows x86-64
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.2.0 pkginfo/1.6.1 requests/2.25.0 setuptools/49.2.1 requests-toolbelt/0.9.1 tqdm/4.54.1 CPython/3.9.0

File hashes

Hashes for smoldyn-2.63a1.dev20201212-cp39-cp39-win_amd64.whl
Algorithm Hash digest
SHA256 f175bbabc949e6ed1d5da4441d3af0270e7a7367c75fb1b3fa2ca7112335374f
MD5 a59f67d1cba2da1215a33c81fe43df9b
BLAKE2b-256 29e30b75c003cfd2d2172c1aa23f418e6339281d7f028ac96a1d84767630afca

See more details on using hashes here.

File details

Details for the file smoldyn-2.63a1.dev20201212-cp39-cp39-manylinux2010_x86_64.whl.

File metadata

  • Download URL: smoldyn-2.63a1.dev20201212-cp39-cp39-manylinux2010_x86_64.whl
  • Upload date:
  • Size: 1.7 MB
  • Tags: CPython 3.9, manylinux: glibc 2.12+ x86-64
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.2.0 pkginfo/1.6.1 requests/2.25.0 setuptools/51.0.0 requests-toolbelt/0.9.1 tqdm/4.54.1 CPython/3.8.6

File hashes

Hashes for smoldyn-2.63a1.dev20201212-cp39-cp39-manylinux2010_x86_64.whl
Algorithm Hash digest
SHA256 c3a51347ad2418d8b74be850d4abc4a6991e2e962f5b0229aa25856969ac495d
MD5 062a0946c9a2cff41b6cdd3a99079342
BLAKE2b-256 33bd0379ea89992272ef788c270c0061a9bdb2e2b0840fcb663a8aeba4c3c777

See more details on using hashes here.

File details

Details for the file smoldyn-2.63a1.dev20201212-cp39-cp39-macosx_10_15_x86_64.whl.

File metadata

  • Download URL: smoldyn-2.63a1.dev20201212-cp39-cp39-macosx_10_15_x86_64.whl
  • Upload date:
  • Size: 1.0 MB
  • Tags: CPython 3.9, macOS 10.15+ x86-64
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.2.0 pkginfo/1.6.1 requests/2.25.0 setuptools/51.0.0 requests-toolbelt/0.9.1 tqdm/4.54.1 CPython/3.9.0

File hashes

Hashes for smoldyn-2.63a1.dev20201212-cp39-cp39-macosx_10_15_x86_64.whl
Algorithm Hash digest
SHA256 97b5201138c8ea1ee986113ca426cba56461f58eb868e8a7d31ab892994b9939
MD5 2bd9a3508b1f88fc1986969cd336474f
BLAKE2b-256 60f0158dc5bac7f31717db77f29fc18b678f0b214ccbc2894724a9da32dc2d1c

See more details on using hashes here.

File details

Details for the file smoldyn-2.63a1.dev20201212-cp38-cp38-win_amd64.whl.

File metadata

  • Download URL: smoldyn-2.63a1.dev20201212-cp38-cp38-win_amd64.whl
  • Upload date:
  • Size: 817.1 kB
  • Tags: CPython 3.8, Windows x86-64
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.2.0 pkginfo/1.6.1 requests/2.25.0 setuptools/49.2.1 requests-toolbelt/0.9.1 tqdm/4.54.1 CPython/3.8.6

File hashes

Hashes for smoldyn-2.63a1.dev20201212-cp38-cp38-win_amd64.whl
Algorithm Hash digest
SHA256 ca86acf9b7de4a95a7f4c31a975012c3a1f117e157180c94bfea830fb168ac15
MD5 30040799c486764d3e16370b4b7c46fb
BLAKE2b-256 06adf42fefbb57e1b8bfd58d0ad7bc941af5112cef1b84c3c98725e16c704324

See more details on using hashes here.

File details

Details for the file smoldyn-2.63a1.dev20201212-cp38-cp38-manylinux2010_x86_64.whl.

File metadata

  • Download URL: smoldyn-2.63a1.dev20201212-cp38-cp38-manylinux2010_x86_64.whl
  • Upload date:
  • Size: 1.7 MB
  • Tags: CPython 3.8, manylinux: glibc 2.12+ x86-64
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.2.0 pkginfo/1.6.1 requests/2.25.0 setuptools/51.0.0 requests-toolbelt/0.9.1 tqdm/4.54.1 CPython/3.8.6

File hashes

Hashes for smoldyn-2.63a1.dev20201212-cp38-cp38-manylinux2010_x86_64.whl
Algorithm Hash digest
SHA256 466fff35523501a7c3b4a522da21bdb08832c1d4a5aaec47a22a4fc703a68d99
MD5 d99220f7813cdc46af4597add5ca475b
BLAKE2b-256 daeeb5a4f880f9d57f2482aa99166f41edd9763c23c92f1c698eac0cae12514d

See more details on using hashes here.

File details

Details for the file smoldyn-2.63a1.dev20201212-cp37-cp37m-win_amd64.whl.

File metadata

  • Download URL: smoldyn-2.63a1.dev20201212-cp37-cp37m-win_amd64.whl
  • Upload date:
  • Size: 816.6 kB
  • Tags: CPython 3.7m, Windows x86-64
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.2.0 pkginfo/1.6.1 requests/2.25.0 setuptools/47.1.0 requests-toolbelt/0.9.1 tqdm/4.54.1 CPython/3.7.9

File hashes

Hashes for smoldyn-2.63a1.dev20201212-cp37-cp37m-win_amd64.whl
Algorithm Hash digest
SHA256 ba38bdd78bd672a894fb608ba4f76ff6d88cb8e62cbff8631acaf4158991bdc8
MD5 70154e37f1746f3c53652fce52558043
BLAKE2b-256 8706cfa78e77c76f7e4667cdd1d8f127db4146e19f9fe722224704ddf3122e41

See more details on using hashes here.

File details

Details for the file smoldyn-2.63a1.dev20201212-cp37-cp37m-manylinux2010_x86_64.whl.

File metadata

  • Download URL: smoldyn-2.63a1.dev20201212-cp37-cp37m-manylinux2010_x86_64.whl
  • Upload date:
  • Size: 1.7 MB
  • Tags: CPython 3.7m, manylinux: glibc 2.12+ x86-64
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.2.0 pkginfo/1.6.1 requests/2.25.0 setuptools/51.0.0 requests-toolbelt/0.9.1 tqdm/4.54.1 CPython/3.8.6

File hashes

Hashes for smoldyn-2.63a1.dev20201212-cp37-cp37m-manylinux2010_x86_64.whl
Algorithm Hash digest
SHA256 bf40fadbacb85cb93244e587831bab8b573281a70c021f8dfd1ac79368652cfe
MD5 dc2b4c6859db2230cd01faed27255a06
BLAKE2b-256 7fdbdaac11d0a0abe2deccfe180a4bc4d29a75df140322202193c831a37d1e24

See more details on using hashes here.

Supported by

AWS AWS Cloud computing and Security Sponsor Datadog Datadog Monitoring Fastly Fastly CDN Google Google Download Analytics Microsoft Microsoft PSF Sponsor Pingdom Pingdom Monitoring Sentry Sentry Error logging StatusPage StatusPage Status page